Overview of Galaxy | Overview of Galaxy: Quick review of Galaxy 101/102
| Lecture | 10/2019 | Beginner |
Using Galaxy to analyze RNA-Seq data | Using Galaxy for handling RNA-seq data
| Walkthrough | 10/2019 | Beginner |
Introduction to G-OnRamp | Introduction to G-OnRamp
| Lecture | 10/2019 | Beginner |
Introduction to G-OnRamp Walkthrough | Use G-OnRamp to create a genome browser for the D. biarmipes F element | Walkthrough | 10/2019 | Beginner |
Customize the Genome Browsers produced by G-OnRamp | Customize the Genome Browsers produced by G-OnRamp
| Walkthrough | 10/2019 | Advanced |
Explore the Genome Browsers created by G-OnRamp | Explore the Genome Browsers created by G-OnRamp | Walkthrough | 10/2019 | Advanced |
Transfer large genomic datasets to G-OnRamp | Transfer large genomic datasets to G-OnRamp | Walkthrough | 10/2019 | Advanced |
Use G-OnRamp to set up a collaborative annotation environment on Apollo | Use G-OnRamp to set up a collaborative annotation environment on Apollo | Lecture | 10/2019 | Advanced |
Set up a collaborative annotation environment on Apollo for Drosophila | Set up a collaborative annotation environment on Apollo for Drosophila biarmipes | Walkthrough | 10/2019 | Advanced |
Use Apollo to do collaborative genome annotation | Use Apollo to do collaborative genome annotation | Walkthrough | 10/2019 | Advanced |
Comparative Gene Annotation with Galaxy / G-OnRamp | Comparative Gene Annotation with Galaxy / G-OnRamp | Walkthrough | 10/2019 | Advanced |
Deployment options for G-OnRamp (Keynote) | Deployment options for G-OnRamp (e.g., centralized server, Docker, Virtual Machines) on local servers or on a public cloud (e.g., Amazon EC2, Microsoft Azure, Jetstream) | Lecture | 10/2019 | Advanced |
Deployment options for G-OnRamp (PDF) | Deployment options for G-OnRamp (e.g., centralized server, Docker, Virtual Machines) on local servers or on a public cloud (e.g., Amazon EC2, Microsoft Azure, Jetstream) | Lecture | 10/2019 | Advanced |
Virtual Machine Installation Walkthrough | Install G-OnRamp virtual machine image on your computer | Walkthrough | 10/2019 | Advanced |
CloudLaunch Deployment Walkthrough | Launch G-OnRamp on the AWS cloud service provider with CloudLaunch | Walkthrough | 10/2019 | Advanced |
AWS Deployment via Community AMIs Walkthrough | Launch G-OnRamp on the AWS cloud service provider via Community AMIs Walkthrough | Walkthrough | 10/2019 | Advanced |
Storing and Accessing G-OnRamp’s Assembly Hubs outside of Galaxy | Storing and Accessing G-OnRamp’s Assembly Hubs outside of Galaxy | Lecture | 10/2019 | Advanced |
Differential expression analysis with RNA-Seq | Differential expression analysis with RNA-Seq | Lecture | 10/2019 | Advanced |
G-OnRamp Glossary | G-OnRamp glossary: explanation on commonly used terms, datatypes, and tools | Supplement | 12/2018 | Beginner |